WGS:Thylacine:C5757:NextSeq550 - SRA

SRX2376121: WGS:Thylacine:C5757:NextSeq550
1 ILLUMINA (NextSeq 500) run: 283M spots, 83.8G bases, 37.1Gb downloads

Design: Phenol-chloroform extraction. Covaris fragmentation. 550Bp isolations with Ampure XP beads. 6X PCR cycles. Followed standard TrueSeq Nano kit protocol (circa 2013). True average insert size <550bp.

Submitted by: The University of Melbourne

Study: Whole Genome Shotgun sample from Thylacinus cynocephalus

PRJNA354646 • SRP093935 • All experiments • All runs

show Abstracthide Abstract

The extinct Tasmanian tiger or thylacine was a large, carnivorous Australian marsupial whose resemblance to eutherian canines is one of the most striking examples of convergent evolution in mammals. We have sequenced the genome of an ethanol-preserved thylacine pouch young specimen. Associated data for the current genome release (ThyCyn2.0) including gene annotations are available on FigShare: https://melbourne.figshare.com/articles/dataset/ThyCyn2_0_A_chromosome-scale_hybrid_genome_assembly_of_the_extinct_Tasmanian_tiger_Thylacinus_cynocephalus_/19351607

Sample: Whole Genome Shotgun sample from Thylacinus cynocephalus

SAMN06049672 • SRS1819160 • All experiments • All runs

Organism: Thylacinus cynocephalus

Library:

Name: Thylacine C5757 TruSeq Nano 550 NextSeq

Instrument: NextSeq 500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 283M spots, 83.8G bases, 37.1Gb

Run	# of Spots	# of Bases	Size	Published
SRR5055306	283,040,509	83.8G	37.1Gb	2017-10-30

ID:: 3463166

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